Pairwise Alignments

Query, 209 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  211 bits (538), Expect = 6e-60
 Identities = 117/205 (57%), Positives = 150/205 (73%), Gaps = 4/205 (1%)

Query: 7   IIIADDHPLFRNALFQSVHMAISGANLLEADSLDALLTLLNKES-EPDLLLLDLKMPGAN 65
           IIIADDHPLFRNAL Q++  A       EADS DAL ++L+ ++   DL+LLDL+MPG++
Sbjct: 8   IIIADDHPLFRNALRQALSSAFEHTQWYEADSADALQSVLDSQTVNYDLVLLDLQMPGSH 67

Query: 66  GMSGLIHLRSEYPDLPIVVISASEEPSVVSQVKSHGAFGFIPKSSDMRSLIAALNQVLNG 125
           G S LIHLRS YP+LP+VVISA E+ + +S+   +G  GFIPKS+ M +L  AL  VL G
Sbjct: 68  GYSTLIHLRSHYPELPVVVISAHEDINTISRAIHYGGSGFIPKSASMETLKEALTAVLFG 127

Query: 126 EPYFPAHLLVDGFVGND---LAEKVAALTPQQYKVLGMLSDGLLNKQIAYELNVSEATIK 182
           + + PA   +     +D   +A K++ LTPQQYKVL M ++GLLNKQIAY+L VSEATIK
Sbjct: 128 DIWLPAGAEIIPIEDDDTDKMANKLSDLTPQQYKVLQMFAEGLLNKQIAYDLGVSEATIK 187

Query: 183 AHMTAIFRKLGVKNRTQAVILLKEM 207
           AH TAIFRKLGV+NRTQAVI L ++
Sbjct: 188 AHATAIFRKLGVRNRTQAVIALGQL 212