Pairwise Alignments

Query, 600 a.a., thiol:disulfide interchange protein DsbD from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) from Pseudomonas fluorescens FW300-N1B4

 Score =  298 bits (764), Expect = 3e-85
 Identities = 199/610 (32%), Positives = 301/610 (49%), Gaps = 56/610 (9%)

Query: 5   ILCFSLLFALLTQPAWAIFGNNAGNNTGTASFAPTQNRFVPVDEAFPFNAFQQG-STLFI 63
           +LC  LL   L   A  +  +   +  G+ + +     F+PV EAF  +  +    ++ +
Sbjct: 4   LLCLLLLVLALPASAAGLLESRPSSTLGSINNSAD---FLPVREAFQLSLVESTPQSIKL 60

Query: 64  DWQVKEGYYLYQDRISISGENLEIG--EYSLTEGEPYHDEFFGDVKIYTTPLSVPLPLVA 121
            +   EGYYLY+ R     +  EIG     L +GE  HDEFFGDV++Y   L V LP   
Sbjct: 61  RFVATEGYYLYRHRFQFRADPAEIGLGAAQLPKGEQKHDEFFGDVEVYHGILDVELPRTD 120

Query: 122 YQSGAKVIVQYQGCAKAGFCYPPETRVIDITPFNAESNRVIEPKTNTSTQTTLPQTDNAP 181
            ++   ++V YQGCA  G CYPPET  ++I    A +                       
Sbjct: 121 SRAFT-LVVTYQGCADKGLCYPPETERLNIDGSGAATT---------------------- 157

Query: 182 TSAQDSLANKLAQNWWTPLLFLALGVGLAFTPCVLPMYPILTSIVLGGAQLTQRRALLLS 241
                      + +W    LF   GVGL FTPCVLPM PIL+ +VL G Q+   R   LS
Sbjct: 158 -----------SWSWRELALFFLAGVGLTFTPCVLPMLPILSGVVLRG-QVGGLRGFNLS 205

Query: 242 VIYVQGMALTYTLLGLVVASAGLQF--QAALQHPYVLMGLSVLFVALALSMFGLYSLQLP 299
           + YV  MA  + LLG ++   G Q   QA LQ  +VL+  ++ F   AL+MFG++ L+LP
Sbjct: 206 LAYVLPMAACFALLGALMGMFGAQLNLQARLQSAWVLVPFAMFFAVFALAMFGVFELKLP 265

Query: 300 SGVQTWLNSLSNAQQGGSLPGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGAVA 359
             + + L+ ++   +GGSL G   +G +S L+ SPC +APL+GALLY++ SGD L G + 
Sbjct: 266 HAISSRLDRIAGRTEGGSLWGAAVLGVVSSLLVSPCVSAPLAGALLYISASGDALGGGLK 325

Query: 360 LYALAIGMGIPLILVAVFGNKLLPKAGNWMERVKTLFGFVLLAAPIFLLERIVPEFWSSV 419
           L+ L +GMG PL+LVA  G   LPK+G W+  VK   G +LL   I LL R++P   + +
Sbjct: 326 LFMLGLGMGAPLLLVATGGAAWLPKSGPWLIYVKNAIGVLLLGLAIALLSRVLPGQITLL 385

Query: 420 LWSAL--GLAAFGWLYHVKNSLPFGGWKQSLIGIVAILGLLASAQPLLNHWLAPTQTAQQ 477
           L   L  G+  F          P     Q L+G+  +   LA      +    P     Q
Sbjct: 386 LIGLLAGGVGLFMGALEFVYKPPRKRLGQ-LLGMFLLFYALACWYGAFSGQTDPLNPIGQ 444

Query: 478 VKQI----------QFTRIANLSELQSALAEAKAQGKSVMLDFYADWCVACKEFEKYTFH 527
            + +           +  I   +EL   LAEAK+    ++LD+YADWC++CK  E    +
Sbjct: 445 PRNVASNGQPPIAGNWQTITTPAELDRVLAEAKSSATPLLLDWYADWCISCKVIEHEVLN 504

Query: 528 AKQVENKLSGFVLLQADVTKNQPQDIELLKALNVLGLPTIEFWNAQGEPVPNARITGFMA 587
             +V  +L G+ L++ D+T +  +   LL    + G P + F+   G    + R+ G ++
Sbjct: 505 DAKVVERLKGYRLIRFDITASNAEQRALLDRYKLFGPPALMFFGKDGVERGDVRVIGEIS 564

Query: 588 EQPFLDHLTQ 597
            + F + + +
Sbjct: 565 AKNFAERVAK 574