Pairwise Alignments

Query, 600 a.a., thiol:disulfide interchange protein DsbD from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) from Xanthomonas campestris pv. campestris strain 8004

 Score =  147 bits (371), Expect = 2e-39
 Identities = 160/594 (26%), Positives = 255/594 (42%), Gaps = 68/594 (11%)

Query: 44  VPVDEAFPFNAFQ-QGSTLFIDWQVKEGYYLYQDRISISGE---NLEIGEYSLTEGEPYH 99
           +P D+AF F A    G++L + +    GYYLY+DR S+S E   ++  G     +G  + 
Sbjct: 194 LPADQAFNFEAIVGDGNSLLLRFTPAPGYYLYRDRTSLSLEGTSDIRTGLPRWPQGRTHR 253

Query: 100 DEFFGDVKIYTTPLSVPLPLVAYQ---SGAKVIVQYQGCAKAGFCYPPETRVI------- 149
           DE FGDV +Y     V LPL+  +   +   ++  +QGC   G CYPP TR +       
Sbjct: 254 DEHFGDVVVYFDQAEVTLPLLRDRPDPARVTLVATFQGCQSDGICYPPMTRRVRLDLPAG 313

Query: 150 DITPFN--AESNRVIEP----KTNTSTQTTLPQTDNAP------TSAQDSLANKLAQNWW 197
            ++P N    +  +I P    +         P  D AP       + + S    L +N  
Sbjct: 314 TVSPHNQATATPLLISPLSAGEVAAERAAPGPPADAAPGPDATAGNPERSRPPHLERNLL 373

Query: 198 TPLLF-LALGVGLAFTPCVLPMYPILTSIVLGGAQLTQRR--ALLLSVIYVQGMALTYTL 254
             LL  LA G+ L   PCVL   PIL+  VLG A   + R  A   ++ Y  G+ +++  
Sbjct: 374 AILLLALAGGLVLNLMPCVL---PILSLKVLGLAHSGESRNHARSHAIWYSLGVLVSFAA 430

Query: 255 LGLVVASAGLQFQAA-----LQHPYVLMGLSVLFVALALSMFGLYSLQLPSGVQTWLNSL 309
           +G +V       QAA     LQ P+ +  L+ L  A+ LS+ G+++L    G        
Sbjct: 431 IGGLVIGLRAAGQAAGWGFQLQQPWFVAALAYLMFAVGLSLSGVFTL----GSNLGGIGQ 486

Query: 310 SNAQQGGSLPGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGAVALYALAIGMGI 369
           S A + G L G F  G ++ +V SPC  AP  G  L  A +       +    L +G+ +
Sbjct: 487 SLAARNGPL-GDFFTGVLACVVASPC-IAPFMGTALAYAFTAPAPLAMLVFLTLGLGLAL 544

Query: 370 PLILVAVFGN--KLLPKAGNWMERVKTLFGFVLLAAPIFLL-----ERIVPEFWSSVLWS 422
           P +L+    +  + LP  G WME +K +  F +    I+LL     +R V      ++ +
Sbjct: 545 PFLLIGFIPSLARRLPTPGAWMETLKQVLAFPMYLTAIWLLWVLGKQRGVDALALMLVGA 604

Query: 423 ALGLAAFGWLYHVK-NSLPFGGWKQSLIGIVAILGLLASAQPLLNHWLAPTQTAQQVKQI 481
            L      W    + NS   G    + + ++AI+ ++A  +  L     P  TA +    
Sbjct: 605 TLLALGLWWFERSRWNSHRLGMGLAAAMLVLAIVPVVAVTRLSL-----PRATATE---- 655

Query: 482 QFTRIANLSELQSALAEAKAQGKSVMLDFYADWCVACKEFEKYTFHAKQVENKLS--GFV 539
                 +++     L   +A  + V ++  ADWCV CK  EK    +    + L     V
Sbjct: 656 -----GSVTYTPELLDRLRADNRVVFVNMTADWCVTCKANEKNVLSSTDFRDALRRVDAV 710

Query: 540 LLQADVTKNQPQDIELLKALNVLGLPTIEFWNAQGEP-VPNARITGFMAEQPFL 592
            ++ D T   P+    L     +G+P    +     P V    +TG + E   L
Sbjct: 711 YMKGDWTNVDPKISAFLDQHQAVGVPLYVVYGPGAPPAVLPTVLTGAITEDALL 764



 Score = 97.4 bits (241), Expect = 2e-24
 Identities = 55/125 (44%), Positives = 72/125 (57%), Gaps = 4/125 (3%)

Query: 31  TGTASFAPTQNRFVPVDEAFPFNAFQQG-STLFIDWQVKEGYYLYQDRISI-SGENLEIG 88
           T  A+ A T+   +PVD+AF  +A   G   + + W++  GYYLY+ RIS+ SG+    G
Sbjct: 27  TAPAAQAVTEADLLPVDQAFALSAKADGRDRIALTWKIAPGYYLYRHRISVKSGQGFTAG 86

Query: 89  EYSLTEGEPYHDEFFGDVKIYTTPLSVPLPLVAY--QSGAKVIVQYQGCAKAGFCYPPET 146
              L EGE  HDEFFG V+ Y T L   L   A   Q  A + VQYQGCA AG CYPP+ 
Sbjct: 87  ALDLPEGESKHDEFFGQVQTYRTALQASLAGKAAPGQRSAILQVQYQGCADAGVCYPPQR 146

Query: 147 RVIDI 151
           R + +
Sbjct: 147 RELRV 151