Pairwise Alignments

Query, 600 a.a., thiol:disulfide interchange protein DsbD from Vibrio cholerae E7946 ATCC 55056

Subject, 689 a.a., thiol:disulfide interchange protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  108 bits (270), Expect = 7e-28
 Identities = 110/407 (27%), Positives = 174/407 (42%), Gaps = 49/407 (12%)

Query: 206 GVGLAFTPCVLPMYP--ILTSIVLGGAQLTQRRALLLSVIYVQGMALTYTLLG---LVVA 260
           G+ L   PCV P+    +L+   +G  +L +R A    V Y  G  L   +LG   LV+ 
Sbjct: 306 GLLLNLMPCVFPILSLKVLSLTHMGDERLARRGA----VAYTLGAVLVCVMLGALILVLR 361

Query: 261 SAGLQFQAA--LQHPYVLMGLSVLFVALALSMFGLYSLQLPSGVQTWLNSLSNAQQGGSL 318
             GLQ   A  LQ P +++ L +L +A+ L++ GL+ +         L+S S  QQ    
Sbjct: 362 QFGLQVGWAFQLQRPEIIVALILLMMAIGLNLAGLFEMGT-------LSSGSRLQQQQGP 414

Query: 319 PGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGAVALYALAIGMGIPLILVAVFG 378
            G F  G ++  V +PC T P     L  A       G +    L +GM +P +LV    
Sbjct: 415 AGDFWTGVLAAFVATPC-TGPFMATALGAALVLPAYVGLMVFAGLGLGMALPFLLVGFVP 473

Query: 379 --NKLLPKAGNWMERVKTLFGFVLLAAPIFLLERIVPE------FWSSVLWSALGLAAF- 429
              + +PK G WM   K +F   +L   + L+  ++ +      F + +L   LGLA + 
Sbjct: 474 ALRQRMPKPGAWMVTAKRIFAVPMLLTALGLVWVLMQQTDRQYVFVALLLAMLLGLALWL 533

Query: 430 -GWLYHVKNSLPFGGWKQSLIGIVAILGLLASAQPLLNHWLAPTQTAQQVKQIQFTRIAN 488
            G L H     P   W  +L+ ++ + G L S  P      A TQ ++   +       N
Sbjct: 534 MGLLQHGGRERP---WWPALLAVIIVAGTLLSVSP-----GAETQISKAGAETNRPLTFN 585

Query: 489 LSELQSALAEAKAQGKSVMLDFYADWCVACKEFEKYTFHAK--QVENKLSGFVLLQADVT 546
             +L + + E     + V + F ADWC+ CK  E      +  Q   + +G  ++  D T
Sbjct: 586 EKDLSALIME-----QDVFVYFSADWCLTCKVNETTAIERQDTQAAFERAGMAVMLGDWT 640

Query: 547 KNQPQDIELLKALNVLGLPTIEFW----NAQGEPVPNARITGFMAEQ 589
              PQ  E L      G+P +  W    N Q E +P    +  + E+
Sbjct: 641 NGDPQITEFLAKHQRSGVP-LYLWYKKGNLQPEVLPQILTSSLLIER 686