Pairwise Alignments

Query, 600 a.a., thiol:disulfide interchange protein DsbD from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., membrane protein containing cytochrome c assembly protein, transmembrane region domain from Marinobacter adhaerens HP15

 Score =  390 bits (1003), Expect = e-113
 Identities = 244/620 (39%), Positives = 346/620 (55%), Gaps = 43/620 (6%)

Query: 4   LILCFSLLFALLTQPAWAIFGNNAGNNTGTASFAPTQNRFVPVDEAFPFNAFQQGSTLFI 63
           LIL  +L+  L +  AWA+ GN      G   F    + F+PVDEA PF+      T+ +
Sbjct: 20  LILALALV-CLSSPSAWALGGN------GGLLFGGQGSDFLPVDEALPFSFSTNADTVVL 72

Query: 64  DWQVKEGYYLYQDRISISGENLEI--GEYSLTE-GEPYHDEFFGDVKIYTTPLS--VPLP 118
            W +  G+YLY+DRISI+  N E+  GE + +  G    DEFFG   ++  P+   VP+ 
Sbjct: 73  SWNITPGHYLYRDRISITATNPEVSLGEPTFSAPGTVTEDEFFGKTTVFFDPVDARVPVA 132

Query: 119 LVAYQSGAKVIVQYQGCAKAGFCYPPETRVIDITPFNAESNRVIEPKTNTSTQTTLPQTD 178
           L A    A++ V YQGCAKAG CYPP+TR +     +  S       + T+        D
Sbjct: 133 LPAGLREAELQVTYQGCAKAGLCYPPQTRDVLFYQGSGGSG------SQTAATPGFASGD 186

Query: 179 NAP--TSAQDSLANKLAQNWWTPL--LFLALGVGLAFTPCVLPMYPILTSIVLGGAQLTQ 234
           + P  T     LA  LAQ     +  +FL LG+GL FTPCVLPM PI++S+V G    T 
Sbjct: 187 SVPVDTETATGLAGFLAQQSTLVIAGVFLLLGLGLTFTPCVLPMVPIISSLVSGRNTRTT 246

Query: 235 RRALLLSVIYVQGMALTYTLLGLVVASAGLQF--QAALQHPYVLMGLSVLFVALALSMFG 292
             ALLLS  YV GMALTY   G++    G  F  QA LQ P+VL   +++FV  ALSMF 
Sbjct: 247 GHALLLSGSYVLGMALTYAAAGVLTGLLGASFNLQAQLQSPWVLSVFALMFVVFALSMFD 306

Query: 293 LYSLQLPSGVQTWLNSLSNAQQGGSLPGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGD 352
           L+ +QLP  ++  LN  S+   G  +  +F +GA+S L+ SPC +APL+G+LLY++ + D
Sbjct: 307 LFEIQLPRFIREPLNDASHRLTGSRVFSIFGIGALSALIVSPCVSAPLAGSLLYISTTQD 366

Query: 353 LLTGAVALYALAIGMGIPLILVAVFGNKLLPKAGNWMERVKTLFGFVLLAAPIFLLERIV 412
            + G VAL+AL +GMGIPLILVAV G KLLP  G+WM  VK  +G +LLA  I+L+ER+V
Sbjct: 367 AVIGGVALFALGLGMGIPLILVAVGGRKLLPTTGHWMTAVKHFYGVMLLAVAIWLVERLV 426

Query: 413 PEFWSSVLWSALGLAAFGWLYHVKNSLPFGGWKQSLIGIVAI-----LGLLASA------ 461
           P + +  LW  L +A  G      ++    GW+++  G+  +     L LLA A      
Sbjct: 427 PGWLALTLWGLL-VAITGVQLGAFDAAK-AGWERTRKGLGLVLFAYGLALLAGAVGGAND 484

Query: 462 --QPLLNHWLAPTQT----AQQVKQIQFTRIANLSELQSALAEAKAQGKSVMLDFYADWC 515
             +PL    +A   +       ++   F R+   +++Q+ L +A+ QG+ V+LDFYADWC
Sbjct: 485 PLKPLAPFTIASASSGGIGTAGIQHADFVRVERPADIQAMLEQAREQGRPVLLDFYADWC 544

Query: 516 VACKEFEKYTFHAKQVENKLSGFVLLQADVTKNQPQDIELLKALNVLGLPTIEFWNAQGE 575
           ++CK  E+  F    V   LS F LLQ D+T N P+   +L  L + G P I F+ + G+
Sbjct: 545 ISCKVMERNVFSKPDVIQALSPFTLLQIDMTDNTPEQQAMLDELGLFGPPAILFYGSNGQ 604

Query: 576 PVPNARITGFMAEQPFLDHL 595
            +   R+ G M  + FL HL
Sbjct: 605 ELAQRRVLGEMDREEFLGHL 624