Pairwise Alignments

Query, 600 a.a., thiol:disulfide interchange protein DsbD from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., thiol:disulfide interchange protein DsbD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  520 bits (1338), Expect = e-152
 Identities = 280/604 (46%), Positives = 394/604 (65%), Gaps = 21/604 (3%)

Query: 9   SLLF-ALLTQPAWAIFGNNAGNNTGTASFAPTQNRFVPVDEAFPFNAFQQGSTLFIDWQV 67
           SL F ALL     A+ GN   NN G   F  ++   +PVD+AF F+  Q+G+ + ++W +
Sbjct: 6   SLTFTALLLLAPLALSGNAFANNFG---FLKSEPELMPVDQAFAFDFKQEGNKVTLNWVI 62

Query: 68  KEGYYLYQDRISISGENLEIGEYSLTEGEPYHDEFFGDVKIYTTPLSVPLPLVAYQSGAK 127
            +GYY+Y+D++  S    E+G   L +G+P++DE+FG+ ++Y T + +P+ L        
Sbjct: 63  ADGYYMYRDKLKFSVNGAELGTIDLPKGKPHNDEYFGEQEVYYTYIDIPVGLKQADDNGT 122

Query: 128 VIVQYQGCAKAGFCYPPETRVIDITPFNAESNRVIEPKTNTSTQTTLPQTD-----NAPT 182
           + V + GCA+   CYPP  R + +    A   ++     + +T+    QT+     NAP 
Sbjct: 123 LSVTFMGCAEGKLCYPPTKRDVSLKAVAANDGQIATTAASDATEPVTAQTNANSATNAPI 182

Query: 183 SAQDSLANKLAQN--WWTPLLFLALGVGLAFTPCVLPMYPILTSIVLG-GAQLTQRRALL 239
           + QDSL+  L+ +   WT ++F  LG+GLA TPCV PMYPIL+ I++G G +L+  +A  
Sbjct: 183 TQQDSLSQMLSNDSLLWTLVIFFGLGIGLALTPCVFPMYPILSGIIVGQGQKLSTAKAFT 242

Query: 240 LSVIYVQGMALTYTLLGLVVASAGLQFQAALQHPYVLMGLSVLFVALALSMFGLYSLQLP 299
           LS+ YVQGMA+TY++LGLVVASAG+++QAALQHP VL+ L++LF  L+LSMFGLY L+LP
Sbjct: 243 LSMAYVQGMAITYSILGLVVASAGMKYQAALQHPAVLVVLAILFFVLSLSMFGLYDLKLP 302

Query: 300 SGVQTWLNSLSNAQQGGSLPGVFAMGAISGLVCSPCTTAPLSGALLYVAQSGDLLTGAVA 359
           S  Q  +NS+SN Q+GG+L GVF MG ISGLV SPCTTAPLSGAL+YVAQ+GDLL G +A
Sbjct: 303 SRFQEKMNSISNNQKGGNLIGVFLMGVISGLVASPCTTAPLSGALVYVAQTGDLLQGFLA 362

Query: 360 LYALAIGMGIPLILVAVFGNKLLPKAGNWMERVKTLFGFVLLAAPIFLLERIVPEFWSSV 419
           LY L++GMG+PL+++   G KLLP+AG WM  +KT+FGF+L+A  I +L RI     S V
Sbjct: 363 LYVLSMGMGVPLLIIGTSGGKLLPRAGAWMNIIKTVFGFLLIAVSIVMLGRIWTGVVSDV 422

Query: 420 LWSALGLAAFGWLYHVKNSLPFGGWKQSLIGIVAILGLLAS----AQPLLNHW---LAPT 472
           LWS  G++  G+L H +N L    WKQ++  ++ +L LLAS     Q ++ H+    +P 
Sbjct: 423 LWSLWGISFTGYLMH-QNKLSAFNWKQTVRSVLLMLTLLASFSYGFQAVMGHFGFNHSPV 481

Query: 473 -QTAQQVKQIQFTRIANLSELQSALAEAKAQGKSVMLDFYADWCVACKEFEKYTFHAKQV 531
             TA    +  F  I ++ +L   LA A A GK VMLD YADWCVACKEFE  TF   +V
Sbjct: 482 GNTATAEAEHGFKHIKSIEDLDRELAAATAAGKPVMLDLYADWCVACKEFEAITFKDAEV 541

Query: 532 ENKLSGFVLLQADVTKNQPQDIELLKALNVLGLPTIEFWNAQGEPVPNARITGFMAEQPF 591
             +++  VLLQADVTK+   D+ LL+  +VLGLPT+  +N QGEP  + R+TGFM  + F
Sbjct: 542 LARMNKIVLLQADVTKSDAVDVALLEKYHVLGLPTLLMFNEQGEPREDLRVTGFMGPKEF 601

Query: 592 LDHL 595
             HL
Sbjct: 602 AAHL 605