Pairwise Alignments

Query, 600 a.a., thiol:disulfide interchange protein DsbD from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., thiol:disulfide interchange protein dsbD precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 98.6 bits (244), Expect = 8e-25
 Identities = 115/481 (23%), Positives = 193/481 (40%), Gaps = 71/481 (14%)

Query: 127 KVIVQYQGCAKAGFCYPPETRVIDITPFNAESNRVIEPKTNTSTQTTLPQTDNAPTSAQD 186
           +V  ++ G AKAG    P  +V    P   E+  V  P  +  +   +     + T A  
Sbjct: 143 EVPFKFSGEAKAGTTATPVAKVDK--PETKEAEEVTAPAASKDSAAMMELVPASATDANA 200

Query: 187 SLANKLAQ-NWWTPLL------------------------FLALGVGLAFTPCVLPMYPI 221
            +   +A  + W P++                        FL  G+   FTPCV P+ P+
Sbjct: 201 DIQPAVASGDLWRPVISELQALGEEHTQGDMSWIYIFVTGFLG-GLLALFTPCVWPIIPM 259

Query: 222 LTSIVLGGAQLTQRRALLLSVIYVQGMALTYTLLGLVV-----ASA--GLQFQAALQHPY 274
             S  L  ++  +++ +  +  Y   + + Y  LGL +     ASA   L   A     +
Sbjct: 260 TVSFFLKRSK-DKKKGIRDAWTYGASIVVIYVALGLAITLIFGASALNALSTNAVFNILF 318

Query: 275 VLMGLSVLFVALALSMFGLYSLQLPSGVQTWLNSL-SNAQQGGSLPGVFAMGAISGLVCS 333
            LM      V  A S FG + ++LPS    W N++ S A+    L  +F M     LV  
Sbjct: 319 FLM-----LVIFAASFFGAFEIRLPS---KWGNAVDSKAESTTGLLSIFLMAFTLSLVSF 370

Query: 334 PCTTAPLSGALLYVAQSGDLLTGAVALYALAIGMGIPLILVAVFGN--KLLPKAGNWMER 391
            CT   +   L+ V+ +G ++  A+ +   AI + +P  L A+F +  K +PK+G WM  
Sbjct: 371 SCTGPIIGFLLVQVSTTGSVVAPAIGMLGFAIALALPFTLFALFPSWLKSMPKSGGWMNV 430

Query: 392 VKTLFGFVLLAAPIFLLE--------RIVPEFWSSVLWSALGLAAFGWLYHVKNSLPFGG 443
           +K   GF+ LA  +  L         R++       LW  +  A  G+    K   P   
Sbjct: 431 IKVTLGFLELAFALKFLSVADLAYGWRLLDRETFLALWIVI-FALLGFYLLGKIKFPHDD 489

Query: 444 WKQSLIGI----VAILGLLASAQPLLNHWLAPTQTAQQVKQIQFTRIANL---------S 490
              + +G+    +A++ L  +   +   W AP +          T+  NL          
Sbjct: 490 -DDNKVGVTRFFMALISLAFAVYMVPGLWGAPLKAVSAFAPPMHTQDFNLYKNEVHAKFD 548

Query: 491 ELQSALAEAKAQGKSVMLDFYADWCVACKEFEKYTFHAKQVENKLSG-FVLLQADVTKNQ 549
           +    +  A+  GK VMLDF    CV C++ E   +   +V + ++  +VL+   V    
Sbjct: 549 DYDLGMEYARLNGKPVMLDFTGYGCVNCRKMEAAVWTDPKVSDLINNDYVLITLYVDNKT 608

Query: 550 P 550
           P
Sbjct: 609 P 609