Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  103 bits (256), Expect = 7e-27
 Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 11/177 (6%)

Query: 140 NIHDYKISLAEAERQSQIDPLTQLKNRRGFFTWSEPIAPETL--------LGLIIFDIDH 191
           N H  + + A+ +  S  D LT L NR     W   +             L L++ DIDH
Sbjct: 140 NRHQLQAANAQLQLLSSTDRLTGLYNRGH---WESDLKAAYARHQRYGHALSLVMLDIDH 196

Query: 192 FKQINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAEN 251
           FK++NDTYGH AGD V+ Q+A LL ++        R+GGEEF V     D +     AE 
Sbjct: 197 FKRVNDTYGHQAGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSGAHAFAER 256

Query: 252 IRDYVESHTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRV 308
           +R  VE+  +++  Q I  T+S G    +  S++  +L+  ADQAL ++K+ GRNRV
Sbjct: 257 MRHSVEALEVLYNDQTIRFTISLGVADLSQPSNDHADLIARADQALYTSKKTGRNRV 313