Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N1B4

 Score =  104 bits (259), Expect = 7e-27
 Identities = 68/173 (39%), Positives = 94/173 (54%), Gaps = 12/173 (6%)

Query: 144 YKISLAEAERQSQIDPLTQLKNRRGFFTWSEPIAPE--------TLLGLIIFDIDHFKQI 195
           Y+  L E  +++ IDPLT L NR     WSE +  E        T L L + D+DHFK+I
Sbjct: 505 YREHLEEQRQKALIDPLTGLPNRAA---WSERLEHEIGQWQQHGTTLLLAMLDLDHFKRI 561

Query: 196 NDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDY 255
           ND YGH AGD VL+ IA +L + L       R+GGEEF++            L E +R  
Sbjct: 562 NDNYGHLAGDKVLKIIANVLRKRLRGTDFIARFGGEEFVLLMPATLPMVGAKLLETLRAS 621

Query: 256 VESHTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRV 308
           +E+    ++G+++ +T+S G T      H+ D +L  ADQAL  AK  GRNRV
Sbjct: 622 IEACPFHFKGERVTITISMGLTAFRPGEHS-DLVLKRADQALYRAKNNGRNRV 673