Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 90.5 bits (223), Expect = 7e-23
 Identities = 67/164 (40%), Positives = 87/164 (53%), Gaps = 11/164 (6%)

Query: 154 QSQIDPLTQLKNR-----RGFFTWSEPIAPETLLGLIIFDIDHFKQINDTYGHPAGDYVL 208
           +SQ D LT L NR     R      +       L +++ DIDHFK+IND +GH  GD VL
Sbjct: 302 KSQTDSLTGLANRSALDGRFAVALEQARRYHRPLSIVMLDIDHFKRINDEFGHQMGDRVL 361

Query: 209 RQIAGLLEQNLPPLSCCVRWGGEEFLV-CFECDDMANVIGLAENIRDYVESHTLMWQGQQ 267
           R+IAGLL+  L       RWGGEEFLV C E + +   +  AE I + V +       +Q
Sbjct: 362 REIAGLLQSCLRGTDAVGRWGGEEFLVLCPETNGLQAEV-FAERICEQVRAFPFSTGQRQ 420

Query: 268 IALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVIAD 311
              +LSAG     + +   D+LL  AD AL  AKR GR+RV  D
Sbjct: 421 ---SLSAG-VAELIPADTTDSLLRRADAALYRAKRGGRDRVCLD 460