Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 15/162 (9%)

Query: 158 DPLTQLKNRRGFFTWSEPIAPETL--------LGLIIFDIDHFKQINDTYGHPAGDYVLR 209
           D LT+L NR+        +A E L         G++  D+DHFK+INDTYGH AGD VL+
Sbjct: 296 DVLTRLLNRKFL---PVVMAKEVLYARQSNNAFGVLAIDVDHFKRINDTYGHEAGDQVLQ 352

Query: 210 QIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYV-ESHTLMWQGQQI 268
           Q+  LL  N        R GGEEFL+     D +  +  AE +R+ +   H  +  G  +
Sbjct: 353 QVGALLASNTRGGDYAFRLGGEEFLLVLVDIDASKALAAAEKLRERIAREHFRLSSGDVL 412

Query: 269 ALTLSAGCTMGAMMSH-NWDNLLHTADQALLSAKRLGRNRVI 309
            +T+S G  M     H +++ LL  AD+AL  AK  GRNR +
Sbjct: 413 QVTVSVG--MAVHDGHPDYERLLQQADRALYQAKNGGRNRCV 452