Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., GGDEF family protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 22/210 (10%)

Query: 109 IMCADGVQRWFSVSAQIEPSCRDDLHIITF-RNIHDYKISLAEAERQSQIDPLTQLKNRR 167
           +M A G++    V     P   + L +  F R   +Y+  L +A+R    D LT L+NR+
Sbjct: 102 MMEARGIRTCLRVGGTQAPGAAEQLLLQGFARFFQNYRSLLDDAQR----DALTGLRNRK 157

Query: 168 GF-------FTWSEPIAPETLLGLIIFDIDHFKQINDTYGHPAGDYVLRQIAGLLEQNLP 220
            F       F  +   A E  + L I DIDHFK++NDT+GH  GD VL  +A L+++   
Sbjct: 158 TFDDMILRLFAANADGAQENAVWLGIVDIDHFKRVNDTFGHLYGDEVLLLVAQLMQRCFR 217

Query: 221 PLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMWQGQQIALTLSAG---CT 277
                 R+GGEEF++     D    + L E  R  V  H+    G    +TLS G    +
Sbjct: 218 QDDLLFRFGGEEFVIVLRGVDRDTAVSLFERFRRAVAEHSFPQVG---TVTLSTGIVELS 274

Query: 278 MGAMMSHNWDNLLHTADQALLSAKRLGRNR 307
            G ++S     +L  AD+AL  AK+ GRNR
Sbjct: 275 DGRLVS----QMLDEADKALYWAKQHGRNR 300