Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., diguanylate cyclase with PAS/PAC sensor from Pseudomonas syringae pv. syringae B728a

 Score =  108 bits (270), Expect = 2e-28
 Identities = 77/199 (38%), Positives = 101/199 (50%), Gaps = 13/199 (6%)

Query: 119 FSVSAQIEPSCRDDLHIITFRNI-HDYKISLAEAERQSQI---DPLTQLKNRRGF-FTWS 173
           F     I P C  +  I  + +I  D    L   ++  +I   DPLT L NRR    T  
Sbjct: 221 FYAEHSISPLCNLEGAITHYVSISQDVTTRLGREQKLLEIAHSDPLTGLDNRRSAEHTLE 280

Query: 174 EPIAPETLLG----LIIFDIDHFKQINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWG 229
             I   ++ G    LII DIDHFK +ND YGHPAGD V+  +A +L+Q +  L    RWG
Sbjct: 281 RQIPAVSMSGKPFSLIICDIDHFKAVNDRYGHPAGDSVITSVAAILKQRIRLLDVAARWG 340

Query: 230 GEEFLVCFECDDMANVIGLAENIRDYVESHTLMWQGQQIALTLSAGCTMGAMMSHNWDNL 289
           GEEFL+      +     LAE IR+ VES  +   G   ++T+S G            +L
Sbjct: 341 GEEFLILVPDSSLKQAAELAERIRNSVESLVIPETG---SVTISLG-VAELSAGETAASL 396

Query: 290 LHTADQALLSAKRLGRNRV 308
           +  AD+AL  AKRLGRNRV
Sbjct: 397 IQRADKALYQAKRLGRNRV 415