Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Synechococcus elongatus PCC 7942

 Score =  100 bits (250), Expect = 1e-25
 Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 15/240 (6%)

Query: 83   EIIAQWQKTVDEARAQGEDVAHMPALIMCADGVQR-WFSVSAQIEPSCRDD-----LHII 136
            E  A+  + +D    QGE       L+   DG  R +  +   I  S +       L I 
Sbjct: 789  EEAAKLLQAIDSRVFQGEQTTEEIHLVNPKDGQLRVYLEIKTPIYESAQSSNIIGLLGIS 848

Query: 137  TFRNIHDYKISLAEAERQSQIDPLTQLKNRRGFFTWSEP-------IAPETLLGLIIFDI 189
            T  +I + K    + ++Q+  D LT + NRR F T ++        I  +T L L+I DI
Sbjct: 849  T--DITEQKKLEQKLQQQATTDALTGILNRRQFITLAQAELNRIYRIQRDTSLSLVIIDI 906

Query: 190  DHFKQINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLA 249
            DHFK IND+YGH  GD VL     + +QN+  +    R GG+EF++     +      + 
Sbjct: 907  DHFKTINDSYGHTVGDQVLILWTNICQQNIREVDIFARLGGDEFVLMLPETNGKQAYQVM 966

Query: 250  ENIRDYVESHTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVI 309
            + IR  V   +L    Q IA+T+S G  +        D  L  AD+AL  AK+ GR+R+I
Sbjct: 967  DRIRQLVIQQSLHLPQQAIAITISVGIAVWTPEILTLDQFLERADRALYQAKQQGRDRII 1026