Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  107 bits (266), Expect = 9e-28
 Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 7/178 (3%)

Query: 139 RNIHDYKISLAEAERQSQIDPLTQLKNRRGFFTWSEPIAPETLLG-----LIIFDIDHFK 193
           + +   K    E +RQ+  DP+T L NRR F   S  +  E         L+I DID+FK
Sbjct: 394 KTLEQLKAKQGELKRQANTDPMTHLFNRRYFDVTSPLLLTEAKATGAHWTLLIIDIDNFK 453

Query: 194 QINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIR 253
            INDTYGH  GD V+ + A +L+QN  P     R+GG+EF++   C ++ N   +AE IR
Sbjct: 454 SINDTYGHHVGDLVIIEFAAVLKQNQRPQDIACRFGGDEFVLLLNC-NLDNATRIAERIR 512

Query: 254 DYVESHTLMWQ-GQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVIA 310
              E   +  Q G+++  T+S G    +  + N    L  AD AL  +K LGRN+V++
Sbjct: 513 ANTERLPITTQEGEKLHFTVSIGVHPVSSSADNMQEALQGADAALYESKGLGRNKVVS 570