Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 66/177 (37%), Positives = 93/177 (52%), Gaps = 11/177 (6%)

Query: 144 YKISLAEAERQ----SQIDPLTQLKNRRGFF------TWSEPIAPETLLGLIIFDIDHFK 193
           Y+ + A+A RQ    ++ DPLT L NRRG          +   AP  L  L++ D+DHFK
Sbjct: 183 YEGTRAKAARQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRL-SLLVLDLDHFK 241

Query: 194 QINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIR 253
            IND YGH AGD VL  +A +++  +       R GGEEF +     D+A    +AE IR
Sbjct: 242 SINDRYGHEAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGAREVAEKIR 301

Query: 254 DYVESHTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVIA 310
             +ES  L+  G  +++T+S G         ++  L  +AD  L  AK+ GRNRV A
Sbjct: 302 KAIESTALIGPGGSLSVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGRNRVSA 358