Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 6/170 (3%)

Query: 149 AEAERQSQIDPLTQLKNRRGFFTWSEPIAPETL-----LGLIIFDIDHFKQINDTYGHPA 203
           A AER++++D LT + NRR FF  +E     ++     L +++ DID+FK +NDT+GH  
Sbjct: 406 ARAEREARVDYLTGVLNRRSFFELAEGELARSIRFGRPLAVLMIDIDYFKAVNDTWGHGV 465

Query: 204 GDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMW 263
           GD VL+ +AGL+ Q L       R GGEEF         +  + +A+ +   V    ++ 
Sbjct: 466 GDEVLQNVAGLIGQTLRGADIFGRTGGEEFTAVIVEASGSEALEVAQRLCAVVAQGKIVG 525

Query: 264 Q-GQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVIADR 312
             G+ I +TLS G ++       ++ L   ADQA+  AKR GRNRV+  R
Sbjct: 526 PGGEAIGVTLSIGVSLLRGRDMAFEILSREADQAMYGAKRAGRNRVVVHR 575