Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 62/182 (34%), Positives = 90/182 (49%), Gaps = 6/182 (3%)

Query: 133 LHIITFRNIHDYKISLAEAERQSQIDPLTQLKNRRGFFTWSEPIAPET-----LLGLIIF 187
           +HI   R+I + K +     R + ID LT + NRR F   SE +          L ++I 
Sbjct: 439 VHIGVIRDITERKATEETLRRLANIDGLTGVLNRRSFTEESELLLSLANRHGRRLSMMIV 498

Query: 188 DIDHFKQINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIG 247
           D DHFK +NDTYGH AGD VL+ + G +   L       R GGEEF +     D     G
Sbjct: 499 DADHFKGVNDTYGHDAGDRVLKALTGEIAGVLRKTDLLGRIGGEEFAILLPETDQEGAEG 558

Query: 248 LAENIRDYVES-HTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRN 306
           LA  +   + +    + +G  + +T+S G +     +  +D +L  AD AL +AK  GR+
Sbjct: 559 LAWRVVLAIRALEVPLPEGGVLKVTVSVGVSCRNTEAATFDWMLKEADTALYAAKHGGRD 618

Query: 307 RV 308
           RV
Sbjct: 619 RV 620