Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 10/180 (5%)

Query: 136 ITFRNIHDYKISLAEAERQSQIDPLTQLKNRRGFFTWSEPIA-----PETLLGLIIFDID 190
           I  R +++    L E   Q+ +D LT +KNR  F    +         +T L +++ DID
Sbjct: 437 IALRELNEANQKLTE---QNTVDSLTGVKNRAAFEKRLQAEGRLSRRQQTPLAILMIDID 493

Query: 191 HFKQINDTYGHPAGDYVLRQIAGLLEQNL-PPLSCCVRWGGEEFLVCFECDDMANVIGLA 249
            FK INDTYGH AGD  L+ IA  L++ L  P     R+GGEEF +          + +A
Sbjct: 494 RFKAINDTYGHLAGDQALKTIAQALKEKLRRPSDLVSRFGGEEFAMILPNTSCDGALQVA 553

Query: 250 ENIRDYVESHTLMWQGQQIALTLSAG-CTMGAMMSHNWDNLLHTADQALLSAKRLGRNRV 308
           E +R  V    L W  Q I LT+S G C    +   +   L+  AD+AL  AK  GRNRV
Sbjct: 554 ELMRSTVSELPLAWGEQAIPLTISIGICAEVIVDDQHTQLLVDQADKALYRAKHEGRNRV 613