Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 16/187 (8%)

Query: 131 DDLH-IITFRNIHDYKISLAEAERQSQIDPLTQLKNRRGF-----FTWSEPIAPETLLGL 184
           D+ H I+  +++ D      + + Q+  DPLT++ NRR          S     +T L +
Sbjct: 316 DEKHSIVVIKDLSDEM----QYKSQANTDPLTKVANRRAINRQLAAAISRSNRQQTPLAV 371

Query: 185 IIFDIDHFKQINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMAN 244
            IFDIDHFK +ND +GH  GD VL+++A +    +       RWGGEEF++  E  D   
Sbjct: 372 CIFDIDHFKAVNDKHGHLVGDDVLQRVAKIFSDAIRKTDFVGRWGGEEFVIILEDTDKEG 431

Query: 245 VIGLAENIRDYVESHTLMWQGQQ--IALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKR 302
               A+ +R  V+  +   QG    +A+TLSAG ++        D L + ADQAL  AK 
Sbjct: 432 AKHFADKLRQEVKRRS---QGIDFPVAITLSAGVSV-YCQDDKQDCLFNHADQALYRAKE 487

Query: 303 LGRNRVI 309
            GR+ V+
Sbjct: 488 SGRDCVV 494