Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., diguanylate cyclase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 77/215 (35%), Positives = 107/215 (49%), Gaps = 21/215 (9%)

Query: 105 MPALIMCADGVQRWFSVSAQIEPSCRDDLHIITFRNIHDYKISLAEAERQSQIDPLTQLK 164
           M AL +  DG Q      AQ   S    L  +  +N   Y+    E + Q+  D LT+L 
Sbjct: 281 MGALAILTDGTQTMGKDQAQALDSAMKHL-ALALKNAMVYR----EVKLQADHDALTRLH 335

Query: 165 NRRGFFTWSEPIAPET--------LLGLIIFDIDHFKQINDTYGHPAGDYVLRQIAGLLE 216
           NRR      E +  E          + L++ D+DHFK INDTYGH AGD VLR++A +L 
Sbjct: 336 NRRSL---DERLRTEFERHRRYGHSMTLLLLDLDHFKAINDTYGHLAGDAVLRELADVLR 392

Query: 217 QNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMWQGQQIALTLS--- 273
            ++       R+GGEEF+V     + A    LAE +R  +E   +   G Q++ T+S   
Sbjct: 393 HSIRTTDFAARYGGEEFVVILPHTEEAQGHMLAERLRHRIEQCRVQHHGVQLSATVSIGV 452

Query: 274 AGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRV 308
           AG + GA    N + L+  AD+AL  AK  GRN V
Sbjct: 453 AGFSPGAFA--NVEELVREADRALYLAKANGRNVV 485