Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  110 bits (274), Expect = 7e-29
 Identities = 66/158 (41%), Positives = 83/158 (52%), Gaps = 6/158 (3%)

Query: 158 DPLTQLKNRRGFFTWSEP-----IAPETLLGLIIFDIDHFKQINDTYGHPAGDYVLRQIA 212
           DPLT L NRR      E      +   T L LI+ DIDHFK INDT+GH  GDYVLR++A
Sbjct: 199 DPLTGLANRRSLCERFEQERQRSLRNNTPLSLILCDIDHFKTINDTHGHECGDYVLRKLA 258

Query: 213 GLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTLMWQGQQIALTL 272
            +L  N+       RWGGEEFL+     D      LAE +R   ES+   + G  I +TL
Sbjct: 259 DMLRTNMRAQDTVCRWGGEEFLLLLPDTDEKGATRLAEKLRTLTESYPFSYHGIPIRVTL 318

Query: 273 SAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNRVIA 310
             G    +   H  D  +  AD+ L  AK  GRNRV++
Sbjct: 319 CFGVHQCSREGHT-DYHIRKADRKLYMAKEQGRNRVVS 355