Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 827 a.a., GAF domain/sensory box/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  104 bits (259), Expect = 8e-27
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 5/174 (2%)

Query: 139 RNIHDYKISLAEAERQSQIDPLTQLKNRRGFFT-----WSEPIAPETLLGLIIFDIDHFK 193
           R+I + K   A   R++  DPLT  +NRR FF      ++  +  ++ L +++ DIDHFK
Sbjct: 632 RDITERKNLEAALLREATTDPLTGGRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFK 691

Query: 194 QINDTYGHPAGDYVLRQIAGLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIR 253
            +ND YGH AGD VLR  A    + L       R GGEEF            +  AE +R
Sbjct: 692 NVNDLYGHQAGDEVLRAFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLR 751

Query: 254 DYVESHTLMWQGQQIALTLSAGCTMGAMMSHNWDNLLHTADQALLSAKRLGRNR 307
             VE  +++++G  +  T+S G T  A     +D++L  AD+AL +AK  GRNR
Sbjct: 752 KRVERRSVVYEGTALQCTVSVGVTSLAAADLGFDDMLRRADRALYAAKDHGRNR 805