Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., response regulator receiver modulated diguanylate cyclase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  104 bits (260), Expect = 4e-27
 Identities = 81/220 (36%), Positives = 112/220 (50%), Gaps = 11/220 (5%)

Query: 98  QGEDVAHMPALIMCADGVQRWFSVSAQIEPSCRDDLHIITFRNIHDYKISLAEAERQSQI 157
           QGE      AL + AD V   F+  A  E + R    +   R    ++  +++  RQ+ I
Sbjct: 236 QGETELAARALDLGADDVV--FAPIAVEEMAVRLRAQLQRKRANDQWRSEVSDRLRQAVI 293

Query: 158 DPLTQLKNRRGFFTWSEPIAPETL-----LGLIIFDIDHFKQINDTYGHPAGDYVLRQIA 212
           DPLT L NRR        IA E L       +++ D DHFK+IND YGH AGD VL + A
Sbjct: 294 DPLTGLYNRRFALGQLSNIAQEALKTHRTFAVLLLDFDHFKKINDAYGHAAGDKVLAETA 353

Query: 213 GLLEQNLPPLSCCVRWGGEEFLVCFECDDMANVIGLAENIRDYVESHTL-MWQGQ-QIAL 270
            LL   L  L    R GGEEFL+     D+     +AE +R  ++ H + +  G+  I +
Sbjct: 354 TLLRTRLRSLDVIARIGGEEFLMVLPDTDLDEARRVAERLRASIDDHPIALPHGKGSIPV 413

Query: 271 TLSAGCTMG--AMMSHNWDNLLHTADQALLSAKRLGRNRV 308
           T+S G  +G  A    +   LL TAD+AL +AK  GRN+V
Sbjct: 414 TISIGLAIGGAAAPEASVSELLETADRALYAAKSEGRNQV 453