Pairwise Alignments

Query, 312 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  109 bits (272), Expect = 2e-28
 Identities = 74/180 (41%), Positives = 98/180 (54%), Gaps = 10/180 (5%)

Query: 136 ITFRNIHDYKISLAEAERQSQIDPLTQLKNRRGF---FTWSEPIA--PETLLGLIIFDID 190
           IT R +H+    L E   QS ID LT +KNR  F         I+   ET + L++ DID
Sbjct: 438 ITLRELHEVNQKLTE---QSTIDSLTGVKNRSAFDKRLLAESRISRRQETPIALLMLDID 494

Query: 191 HFKQINDTYGHPAGDYVLRQIAGLLEQNLP-PLSCCVRWGGEEFLVCFECDDMANVIGLA 249
            FK IND +GH AGD  L+ IA  L+Q+L  P     R+GGEEF +          I +A
Sbjct: 495 RFKSINDQFGHLAGDQALKVIATTLQQHLKRPTDLVSRFGGEEFAIILPNTTAEGAIQVA 554

Query: 250 ENIRDYVESHTLMWQGQQIALTLSAGCTMGAMMS-HNWDNLLHTADQALLSAKRLGRNRV 308
           E+IRD V S  L W+G+ I LT+S G +   + +  +   LL  AD+AL  AK  GRN+V
Sbjct: 555 ESIRDAVTSIGLAWEGKPIPLTVSIGVSADVISNDQHSTELLEQADKALYQAKNSGRNQV 614