Pairwise Alignments

Query, 161 a.a., membrane protein FxsA from Vibrio cholerae E7946 ATCC 55056

Subject, 197 a.a., FxsA cytoplasmic membrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  144 bits (364), Expect = 6e-40
 Identities = 79/168 (47%), Positives = 108/168 (64%), Gaps = 14/168 (8%)

Query: 1   MFPILLFLFIAVPVIEIALFIQVGGVLGVWPTIALVLLTAIVGASLVRSQGLQTLLTVQQ 60
           MF ILL +F+ +PVIE+ + I+VG  LG W T+ LV+ TA+VG SLVRSQG+ TL+ VQQ
Sbjct: 1   MFFILLIIFVLIPVIELNVLIRVGETLGSWTTVGLVIFTAVVGVSLVRSQGIHTLMQVQQ 60

Query: 61  RLAQGQLPAQQILEGVMLAVAGVLLLTPGFFTDILGMLVLLPAPRAYFAKQLMSRVVV-- 118
           +LA+G+ P Q+I+EG+MLA+AG+LLL PGF TD +G+L+L P  RA  A  L  R+ V  
Sbjct: 61  KLARGEAPGQEIVEGMMLAMAGLLLLIPGFVTDFIGLLLLTPLTRAPIAAFLYKRMQVKV 120

Query: 119 ---GNIH--------ASGAGFEQPNPF-HDRANPNGTTYEGEFERKDD 154
              G  H         S       +PF H   +  G T++G++ERK D
Sbjct: 121 SQQGGFHGQFGQGPFGSNGSAGGRSPFDHSPFDEQGNTFDGDYERKPD 168