Pairwise Alignments

Query, 161 a.a., membrane protein FxsA from Vibrio cholerae E7946 ATCC 55056

Subject, 187 a.a., fxsA protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  152 bits (383), Expect = 4e-42
 Identities = 84/175 (48%), Positives = 112/175 (64%), Gaps = 15/175 (8%)

Query: 1   MFPILLFLFIAVPVIEIALFIQVGGVLGVWPTIALVLLTAIVGASLVRSQGLQTLLTVQQ 60
           MF IL  +F+ +PV+E+++ I+VG +LG W TI LVL TA++G SLVRSQGL TL+ VQQ
Sbjct: 1   MFLILFLIFVLIPVVELSVLIRVGEILGTWTTIGLVLFTAVLGVSLVRSQGLSTLMQVQQ 60

Query: 61  RLAQGQLPAQQILEGVMLAVAGVLLLTPGFFTDILGMLVLLPAPR----AYFAKQLMSRV 116
           +LA+G+ P Q+I+EG+MLA+AGVLL+ PGF TD +G+L+L P  R    A   K++  RV
Sbjct: 61  KLARGEAPGQEIVEGMMLAMAGVLLVIPGFVTDFIGLLLLTPLTRRPIAALVFKRMQLRV 120

Query: 117 VVGNIHASGAGF-----EQPN-----PFHDRANPNGTTYEGEFERKDD-QDQHRL 160
           V G       GF      Q N     PF    +  G  YEG+FE K D  D H+L
Sbjct: 121 VSGLQGGMHGGFGSHADRQSNPFDQSPFEQHKHSEGNVYEGDFEHKTDANDAHKL 175