Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., rRNA methylases from Pseudomonas stutzeri RCH2

 Score = 43.5 bits (101), Expect = 2e-09
 Identities = 45/147 (30%), Positives = 61/147 (41%), Gaps = 8/147 (5%)

Query: 4   IALYEPEIAPNTGNIIRLCANCGANLHLIEPLGFDLEEKKVRRAGLDYHDLARVTRHKDY 63
           I L+E +   N G I+R  A  G    L+ P   D    KV R+ +          H   
Sbjct: 105 IYLHEIQDPGNLGTILRTLAWFGNFRCLLSPGSVDPYNPKVVRSSMG------AIFHAPM 158

Query: 64  AAFIEYLQRERGSFRLFACTTKTTQHHVDAQFQQGDVLLFGPETRGLPAELIASLPAEQR 123
              +E L   R  F   AC     +    A F+  D  LFG E RG+P + + +L A Q 
Sbjct: 159 ELDVE-LDSLRTRFERIACLDMHGEPVRSAGFRAFDCYLFGNEARGVPRDQLNALDA-QP 216

Query: 124 IRIPMMPEARSLNLSNAVAIIAFEAWR 150
             IP      SLNL+  V + A+E  R
Sbjct: 217 FTIPGCGAIESLNLAATVNMCAYELSR 243