Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 156 a.a., RNA methyltransferase TrmH, group 2 from Synechococcus elongatus PCC 7942

 Score =  136 bits (342), Expect = 2e-37
 Identities = 79/156 (50%), Positives = 104/156 (66%), Gaps = 7/156 (4%)

Query: 1   MFDIALYEPEIAPNTGNIIRLCANCGANLHLIEPLGFDLEEKKVRRAGLDYHDLARVTRH 60
           M  + LY+PEI PNTGNI R CA     LHLIEPLGF+L ++ ++RAGLDY    ++T H
Sbjct: 1   MPQVVLYQPEIPPNTGNIARTCAATDTPLHLIEPLGFELSDRYLKRAGLDYWPYVQLTTH 60

Query: 61  KDYAAFIEYLQRERGSFRLFACTTKTTQHHVDAQFQQGDVLLFGPETRGLPAELIASLPA 120
            D++ F +  Q++ G  RL A TTK   +++D  FQ  D LLFG ET GLP +++AS   
Sbjct: 61  PDWSVFRQQQQQQGG--RLIAFTTKGELNYLDCDFQATDWLLFGRETSGLPEDVLAS--C 116

Query: 121 EQRIRIPMMPEA--RSLNLSNAVAIIAFEAWRQMGF 154
           + R+RIP  P+A  RSLNLS +VAI  FEA RQ+ F
Sbjct: 117 DHRVRIP-TPQAGVRSLNLSVSVAIGLFEARRQVYF 151