Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., probable tRNA/rRNA methyltransferase from Synechococcus elongatus PCC 7942

 Score = 45.4 bits (106), Expect = 6e-10
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 4/138 (2%)

Query: 14  NTGNIIRLCANCGANLHLIEPLGFDLEEKKVRRAGLDYHDLARVTRHKDYAAFIEYLQRE 73
           N G IIR  A  GA+   +   G D +  KV RA         +    D    +   Q++
Sbjct: 98  NLGTIIRTAAAAGADGLWLTADGVDPDHPKVLRASAGQWFRLPIAIATDLGQTLRSWQQQ 157

Query: 74  RGSFRLFACTTKTTQHHVDAQFQQGDVLLFGPETRGLPAELIASLPAEQRIRIPMMPEAR 133
              +++ +   + T     A   +  VLL G E  GL  +L A   A+  + IP      
Sbjct: 158 --GYQIVSTLPRATTTLWQADLTRPTVLLLGNEGAGLSPDLAAI--ADSAVTIPQAAGVE 213

Query: 134 SLNLSNAVAIIAFEAWRQ 151
           SLN++ A A++ +EA RQ
Sbjct: 214 SLNVAIAAALLLYEARRQ 231