Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., RNA methyltransferase TrmH, group 2 (RefSeq) from Shewanella amazonensis SB2B

 Score =  225 bits (573), Expect = 3e-64
 Identities = 109/158 (68%), Positives = 130/158 (82%), Gaps = 4/158 (2%)

Query: 1   MFDIALYEPEIAPNTGNIIRLCANCGANLHLIEPLGFDLEEKKVRRAGLDYHDLARVTRH 60
           MF IALYEPEIAPNTGNIIRLCAN G  LHLIEPLGFDLEEKK+RRAGLDY D+ RVTRH
Sbjct: 5   MFHIALYEPEIAPNTGNIIRLCANNGCELHLIEPLGFDLEEKKLRRAGLDYSDMTRVTRH 64

Query: 61  KDYAAFIEYLQRERGSFRLFACTTKTTQHHVDAQFQQGDVLLFGPETRGLPAELIASLPA 120
           KD+ +F+E +       R+ ACTTK ++ H + ++Q GDVLLFGPE+RGLP ++I S+P 
Sbjct: 65  KDFPSFLEAM----AGRRILACTTKGSRPHTELEYQAGDVLLFGPESRGLPMDIINSVPT 120

Query: 121 EQRIRIPMMPEARSLNLSNAVAIIAFEAWRQMGFDGAR 158
           EQR+RIPM+  +RSLNLSNAVAII++EAWRQ GF GAR
Sbjct: 121 EQRLRIPMVESSRSLNLSNAVAIISYEAWRQQGFGGAR 158