Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., RNA methyltransferase TrmH, group 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 12/159 (7%)

Query: 4   IALYEPEIAPNTGNIIRLCANCGAN-LHLIEPLGFDLEEKKVRRAGLDYHDLARVTRHKD 62
           I L  P++A N G + R   NCG   L L+ P    L EK +  A      L      + 
Sbjct: 20  IVLVRPQLAENIGMVARAMLNCGLTALRLVAPREDWLAEKAIASASGADGLLREARFFET 79

Query: 63  YAAFIEYLQR------ERGSFRLFACTTKTTQHHVDAQFQQGD--VLLFGPETRGLPAEL 114
             A I  + R       R        T +     +  Q   G+   ++FGPE  GL  + 
Sbjct: 80  TEAAIADINRVYATTARRRDMIKRVLTPRGAAERLRTQVAAGERCAVMFGPERTGLSNDD 139

Query: 115 IASLPAEQRIRIPMMPEARSLNLSNAVAIIAFEAWRQMG 153
           +A   A+  + +P+ P   SLNL+ AV ++ +E W Q G
Sbjct: 140 VAL--ADAIVEVPLNPAYCSLNLAQAVLLLGYE-WYQAG 175