Pairwise Alignments

Query, 158 a.a., tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL from Vibrio cholerae E7946 ATCC 55056

Subject, 154 a.a., putative rRNA methylase SpoU family from Dechlorosoma suillum PS

 Score =  177 bits (449), Expect = 7e-50
 Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 4/158 (2%)

Query: 1   MFDIALYEPEIAPNTGNIIRLCANCGANLHLIEPLGFDLEEKKVRRAGLDYHDLARVTRH 60
           M  I LY+PEI PNTGNIIRLCAN G  LHLIEPLGFDL +K++RRAGLDYH+ A+VT H
Sbjct: 1   MTAIILYQPEIPPNTGNIIRLCANTGCELHLIEPLGFDLSDKQLRRAGLDYHEYAKVTHH 60

Query: 61  KDYAAFIEYLQRERGSFRLFACTTKTTQHHVDAQFQQGDVLLFGPETRGLPAELIASLPA 120
            D+ + +  +       R+FA +T+  Q +   +++Q D  +FG ET GLP E++     
Sbjct: 61  GDWQSCLVAM----AGRRIFALSTRGGQRYDTVRYRQDDAFVFGRETAGLPEEILCQFAP 116

Query: 121 EQRIRIPMMPEARSLNLSNAVAIIAFEAWRQMGFDGAR 158
           EQR+R+PM+P+ RSLNLSNA A++AFE WRQ+ F G R
Sbjct: 117 EQRLRLPMLPDQRSLNLSNAAAVMAFEVWRQLDFAGGR 154