Pairwise Alignments

Query, 464 a.a., two-component system sensor histidine kinase CpxA from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  119 bits (298), Expect = 2e-31
 Identities = 85/303 (28%), Positives = 152/303 (50%), Gaps = 18/303 (5%)

Query: 173 PFQLLLAIMLVSTPLLLWLAWALSKPAQN----LAQAAQRVARGEFVHDPKLERGTAEFQ 228
           P   LL I L+   L+  + + L +  +     L  AA ++A+G  +H      G+    
Sbjct: 231 PLHWLLLIALMGLCLIGLVVYLLVRRLERRVLELEAAATQIAQGS-LHSRVPTEGSDSVG 289

Query: 229 QAGRSFNQMVDAVNQMVSGQQRLLSDISHELRSPLTRLRMANALAMRKLGSSSELER--- 285
           +   +FN M + + + +  Q+ L+  +SHELR+P+ RLR    L M    ++ E  R   
Sbjct: 290 RVAAAFNSMAEHLQRSLMIQRELVRAVSHELRTPVARLRFG--LEMVSDAATPEARRKYM 347

Query: 286 --IDTEAQRLEQMIGDLLALSRMQINSHLMR-EVQPLSSLWEELLKD-AQFEAE---QMH 338
             +D++ Q L++++ ++L  +R++  +  +  +   L +L ++++ + A   A+      
Sbjct: 348 RGMDSDIQDLDKLVDEMLTYARLEQGAPTLNFQRVDLDALIDQVIAELAPLRADVRVSRG 407

Query: 339 KMLTFDAIPERTINGTPKLLMSALENVVRNAIHYGQQQIHVAFTIQDQQLIVSVDDDGEG 398
           + L  +      + G P+ L  A++N+V NA+ +   ++ +++ ++ QQ  + VDDDG G
Sbjct: 408 ECLRAEEGEAAWVEGEPRYLHRAVQNLVSNALRHADNEVRISYRLEAQQCRIDVDDDGPG 467

Query: 399 VPEEELADIFRPFYRVSTARDRHSGGTGLGLAITENAIRQHSGTISANRS-HLGGLQVRF 457
           VPE+    IF PF R+  +R R SGG GLGL+I    I  H G      S  LGG     
Sbjct: 468 VPEQAWDQIFTPFMRIDDSRTRASGGHGLGLSIVRRIIHWHEGRALIGHSVSLGGACFSL 527

Query: 458 TLP 460
           T P
Sbjct: 528 TWP 530