Pairwise Alignments

Query, 464 a.a., two-component system sensor histidine kinase CpxA from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  126 bits (316), Expect = 2e-33
 Identities = 92/295 (31%), Positives = 149/295 (50%), Gaps = 20/295 (6%)

Query: 176 LLLAIMLVSTPLLLWLAWALSKPAQNLAQAAQRVARGEFVHDPKLERGTAEFQQAGRSFN 235
           LLLA+++       W+A  L  P + +A A  R+A GE+     +     E  Q  R FN
Sbjct: 174 LLLAVLIA-----WWIARTLLDPVKRVAAATHRLAAGEYASRVAVSSND-EVGQLARDFN 227

Query: 236 QMVDAVNQMVSGQQRLLSDISHELRSPLTRLR---MANALAMRKLGSSSELERIDTEAQR 292
           Q+   + +    ++  ++D+SHELR+PL+ LR    A    +R L  +S ++ +  E   
Sbjct: 228 QLAYTLERNEKMRREFMADVSHELRTPLSVLRGELEAIEDGVRTLDQAS-MKSLQGEVGM 286

Query: 293 LEQMIGDLLALSRMQINSHLMREVQ-PLSSLWEEL--LKDAQFEAEQMHKMLTF--DAIP 347
           L +++ DL  LS   + +   R+V   L+ L   +  + + +  A Q+H  L     A+P
Sbjct: 287 LSKLVDDLYELSLADVGALTYRKVDCDLAELLTNITDMFEERCAARQLHLQLELAGGALP 346

Query: 348 ERTINGTPKLLMSALENVVRNAIHYGQQ--QIHVAFTIQDQQLIVSVDDDGEGVPEEELA 405
              ++  P  L   + N++ N++ Y      +HV   +Q  ++ V V D G GV  ++L 
Sbjct: 347 ---VHADPGRLQQLIGNLLENSVRYTDAGGTVHVRAALQGDEVRVDVMDSGPGVDPQQLP 403

Query: 406 DIFRPFYRVSTARDRHSGGTGLGLAITENAIRQHSGTISANRSHLGGLQVRFTLP 460
            +F  FYR  T+R+R SGG GLGLAI  +    H GT+SA+ S  GGL +   LP
Sbjct: 404 RLFERFYRGETSRNRASGGAGLGLAICHSIALAHGGTLSADHSPTGGLWLTLCLP 458