Pairwise Alignments

Query, 464 a.a., two-component system sensor histidine kinase CpxA from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., sensor protein CpxA (RefSeq) from Shewanella amazonensis SB2B

 Score =  241 bits (614), Expect = 5e-68
 Identities = 162/456 (35%), Positives = 241/456 (52%), Gaps = 15/456 (3%)

Query: 9   NNLYGRIFAIFWFTMLLVLFAVLTLPHLDPRKSRDLSPETHQRLLESRDRFEQQFRNQSD 68
           N L+ ++   FW    +VL AV +LP L  ++     P+  Q+ L   D+  +    + +
Sbjct: 8   NRLFIKLLLGFWLCSSVVLVAVGSLPLLQQQRESTPIPKELQQTL---DKIARAIEREPE 64

Query: 69  LRAILFQLEGPDSQHRKHDGQP-RFFITDLESNIITNSKQTDFRFKAMQNFCSSIESVQK 127
           L           S+H   DG+P R FIT+ E  I+   +      ++++ F    E  ++
Sbjct: 65  LMEPERMRRWERSRHA--DGKPMRVFITNEEGRILGERQP-----RSLRKFILLAEEAER 117

Query: 128 PQQRLYGRYMLAGPVPITLAKQDLLLYVGMRWDEPPPFLLRLFDKPFQLLLAIMLVSTPL 187
           P    +   M+ GP    +  ++  LY  +    P P  L   +     L   +LVS  L
Sbjct: 118 PIMYQFRDEMVFGPKEFHVDGKEYHLYGRVPGQHPRPLFLFFIEHKLLTLGLAVLVSGLL 177

Query: 188 LLWLAWALSKPAQNLAQAAQRVARGEF---VHDPKLERGTAEFQQAGRSFNQMVDAVNQM 244
              LAW L +P + L Q+A  +ARG     V +  L R   E  Q G +FN M +A+ Q 
Sbjct: 178 CGLLAWHLGRPLKMLKQSADALARGNLGSRVDEATLNRRD-ELGQLGHAFNAMAEAIEQQ 236

Query: 245 VSGQQRLLSDISHELRSPLTRLRMANALAMRKLGSSSELERIDTEAQRLEQMIGDLLALS 304
           V+ QQRL+ DISHELR+PLTRL++A ALA ++   S+EL RI  EA++L+ +I +LL LS
Sbjct: 237 VNNQQRLMGDISHELRTPLTRLQLALALARKRGQDSNELNRIAHEAEQLDALIAELLTLS 296

Query: 305 RMQINSHLMREVQPLSSLWEELLKDAQFEAEQMHKMLTFDAIPERTINGTPKLLMSALEN 364
           R+ + +   +    L+    ++L DA+FEA +  K L  +      ++ TPKLL  A+EN
Sbjct: 297 RVTMGATEAKVDIELAETLGQVLDDAEFEASECGKHLAIEMDDNLLLSHTPKLLARAVEN 356

Query: 365 VVRNAIHYGQQQIHVAFTIQDQQLIVSVDDDGEGVPEEELADIFRPFYRVSTARDRHSGG 424
           ++RNAI Y + Q+ +  T    ++ + + DDG GV + EL  IFRPFYR   +R+R SGG
Sbjct: 357 LLRNAIRYARLQVSLTVTDTQDRIEIQICDDGPGVADAELEAIFRPFYRTDKSRERESGG 416

Query: 425 TGLGLAITENAIRQHSGTISANRSHLGGLQVRFTLP 460
            GLGLAIT  AI    G+ISA     GGL V   LP
Sbjct: 417 WGLGLAITAAAIEAQGGSISAQNRPTGGLCVTICLP 452