Pairwise Alignments

Query, 464 a.a., two-component system sensor histidine kinase CpxA from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., putative two-component system sensor kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  153 bits (386), Expect = 1e-41
 Identities = 104/298 (34%), Positives = 147/298 (49%), Gaps = 13/298 (4%)

Query: 177 LLAIMLVSTPLLLWL-----AWALSKPAQNLAQAAQRVARGEFVH--DPKLERGTAEFQQ 229
           L AI L     +LWL        L KP   L Q  + +A G+              EF Q
Sbjct: 159 LWAIRLTVGLFVLWLFSRLLGHYLIKPLATLQQGTRALASGKLSTRIGEHFSAAEPEFYQ 218

Query: 230 AGRSFNQMVDAVNQMVSGQQRLLSDISHELRSPLTRLRMANALAMRKLGSSSE-LERIDT 288
            G  F++M D + + ++ Q+RL+ D+SHELR+PL R ++A  L    L  +S  L+RI  
Sbjct: 219 LGHDFDEMADVIERTLTTQERLIRDVSHELRTPLARQKLAAELLESDLADTSPYLKRIHA 278

Query: 289 EAQRLEQMIGDLLALSRMQINSHLMREVQ-PLSSLWEELLKDAQFEAE--QMHKMLTFDA 345
           E   L ++I  LL  SR+       R     L  L   LL D +FEA   Q  +     A
Sbjct: 279 ENSELSRLIDTLLGYSRLASGYQAARSTSFTLHELACSLLGDCRFEAAPTQSIEWQALSA 338

Query: 346 IPERTINGTPKLLMSALENVVRNAIHYGQQQIHVAFT--IQDQQLIVSVDDDGEGVPEEE 403
                +     LL+ ALEN+VRN++ Y   + H+  +    D  L ++V+DDG G+ + +
Sbjct: 339 CKYIALETDQSLLLRALENLVRNSLKYAGTECHIQISSHCDDSWLTITVEDDGPGIDDTK 398

Query: 404 LADIFRPFYRVSTARDRHSGGTGLGLAITENAIRQHSGTISANRSHLGGLQVRFTLPL 461
           L  +F PF R   AR    GG GLGLAI    +R   G +SA RS LGGL+V+  LP+
Sbjct: 399 LETLFHPFTRFDEARHASQGGFGLGLAIVRECMRLLGGDVSAGRSELGGLEVKLLLPM 456