Pairwise Alignments

Query, 464 a.a., two-component system sensor histidine kinase CpxA from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  119 bits (299), Expect = 1e-31
 Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 16/311 (5%)

Query: 160 DEPPPFLLRLFDKPFQLLLAIMLVSTPLLLWLAWALSKPAQNLAQAAQRVARGEFVHDPK 219
           D   PF+  L  K + + + +      + + + + +S+    L +     A G+F     
Sbjct: 127 DPDSPFINTLNRKEWFVFVELCAALALISIMVLFVISRRLARLEKTCIAFAYGDF----S 182

Query: 220 LERGTAEFQQAGR---SFNQMVDAVNQMVSGQQRLLSDISHELRSPLTRLRMANALAMRK 276
               T+     G+   SFN M D ++Q++   + L + I+HE R+P+ R++  N   +  
Sbjct: 183 ARASTSSLHSVGQLNLSFNIMADRISQLIQSHKNLTNAIAHESRTPIFRIQ-CNLDMLDD 241

Query: 277 LGSSSE----LERIDTEAQRLEQMIGDLLALSRMQI-NSHLMREVQPLSSLWEELLKDAQ 331
            G   E    LE I  +   L  MI +LL  ++++  ++ L      L  L    L+  Q
Sbjct: 242 SGVRPEQMQYLEGIQEDLNELGGMIEELLHFAKLERPDAQLSLTPTRLYPLLASQLEHLQ 301

Query: 332 FEAEQMHKMLTFDAIPERTINGTPKLLMSALENVVRNAIHYGQQQIHVAFTIQDQQLIVS 391
           FE  +  ++   D++     N    LL+ A  N++RN   Y Q  ++V  +  +  +++ 
Sbjct: 302 FETPKRLQLSGDDSLIAPIAN---HLLLRATSNIIRNGYKYAQSCVNVTLSSDETSVLIE 358

Query: 392 VDDDGEGVPEEELADIFRPFYRVSTARDRHSGGTGLGLAITENAIRQHSGTISANRSHLG 451
           + +DG  +P +    IF PF R+  ARDR SGG GLGLAI +  +RQH G ++   S LG
Sbjct: 359 IANDGPPIPRDYWQSIFEPFVRLDKARDRQSGGHGLGLAIAKQIVRQHQGELTLGDSELG 418

Query: 452 GLQVRFTLPLA 462
           G      LP A
Sbjct: 419 GPCFTLRLPKA 429