Pairwise Alignments

Query, 464 a.a., two-component system sensor histidine kinase CpxA from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., osmolarity sensor protein EnvZ (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  121 bits (303), Expect = 5e-32
 Identities = 82/272 (30%), Positives = 144/272 (52%), Gaps = 13/272 (4%)

Query: 190 WLAWALSKPAQNLAQAAQRVARGEFVHDPKLERGTAEFQQAGRSFNQMVDAVNQMVSGQQ 249
           W A   ++P + L +AA  V+RGEF  DP   +G++E  +   +FNQM  ++ Q+   + 
Sbjct: 177 WFARQQNRPLRRLQKAAISVSRGEFP-DPLPLKGSSELVEVTNAFNQMAHSMKQLEQDRA 235

Query: 250 RLLSDISHELRSPLTRLRMANALAMRKLGSSSELERIDTEAQRLEQMIGDLLALSRMQIN 309
            L++ ISH+LR+PLTR+R+A+ + +         + I  + + ++ +I   +A  R   +
Sbjct: 236 LLMAGISHDLRTPLTRIRLASEMMVE--DDQYLKDGIVNDIEDMDAIISQFIAYIRQ--D 291

Query: 310 SHLMREVQPLSSLWEELLKDAQFEAEQMHKM-LTFDAIPERTINGTPKLLMSALENVVRN 368
               RE   ++ L +++   AQ EA +  ++ L     PE    G    +   L N+V N
Sbjct: 292 QEASREPGQINKLIQDI---AQAEANRDGEIELALADCPEALFQGL--AIKRVLSNLVEN 346

Query: 369 AIHYGQQQIHVAFTIQDQQLIVSVDDDGEGVPEEELADIFRPFYRVSTARDRHSGGTGLG 428
           A  YG   + ++     +++  SV+D+G G+ E ++  +F+PF +   AR   S G+GLG
Sbjct: 347 AFRYGSGWVRISSQFDGKRIGFSVEDNGPGIDESQIPTLFQPFTQGDIARG--SVGSGLG 404

Query: 429 LAITENAIRQHSGTISANRSHLGGLQVRFTLP 460
           LAI +  I +H G I+ +    GGL+ +  LP
Sbjct: 405 LAIIKRIIDRHQGQITLSNRAAGGLKAQVWLP 436