Pairwise Alignments

Query, 464 a.a., two-component system sensor histidine kinase CpxA from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., ATPase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  235 bits (599), Expect = 3e-66
 Identities = 150/455 (32%), Positives = 242/455 (53%), Gaps = 12/455 (2%)

Query: 9   NNLYGRIFAIFWFTMLLVLFAVLTLPHLDPRKSRDLSPETHQRLLESRDRFEQQFRNQSD 68
           N L+ ++   FW    L++  V  LP L     R   P   Q++L S     Q+ ++  +
Sbjct: 3   NRLFIKLLLGFWICSSLIIALVGLLPLLQQNHDRAPIPPHLQKVLAS---IAQRIQDNPE 59

Query: 69  LRAILFQLEGPDSQHRKHDGQP-RFFITDLESNIITNSKQTDFRFKAMQNFCSSIESVQK 127
           L    F       +    +G+P R ++ + +  +I  S+ +    + +++F    +  ++
Sbjct: 60  LVTSDFLRRW--ERRGDMEGKPLRLYLANSQGQVINTSRVS----RGVRSFMLMTDEEKQ 113

Query: 128 PQQRLYGRYMLAGPVPITLAKQDLLLYVGMRWDEPPPFLLRLFDKPFQLLLAIMLVSTPL 187
           P    +   ++ GP   TL  +   LY  +    P P+     +     L   +++S  L
Sbjct: 114 PISHQFKDELVFGPHQFTLQGETYYLYGRLPDIHPRPWFFFFIENKLLTLSLAIVLSGLL 173

Query: 188 LLWLAWALSKPAQNLAQAAQRVARGEFVH--DPKLERGTAEFQQAGRSFNQMVDAVNQMV 245
              LAW L KP  +L ++A  +A G+  +  D    +   E  Q   +FN M D++  MV
Sbjct: 174 CAILAWHLGKPLNSLKKSADALAEGDLSNRVDKATTQRNDEIGQLATAFNSMADSIEAMV 233

Query: 246 SGQQRLLSDISHELRSPLTRLRMANALAMRKLGSSSELERIDTEAQRLEQMIGDLLALSR 305
             QQRL+ DISHELR+PLTRL+++ ALA +K   ++E +RI  EA++LE++I +LL LSR
Sbjct: 234 KNQQRLMGDISHELRTPLTRLQLSLALARKKGQQTTETDRIAYEAEQLEKLIAELLELSR 293

Query: 306 MQINSHLMREVQPLSSLWEELLKDAQFEAEQMHKMLTFDAIPERTINGTPKLLMSALENV 365
           ++++++  +    L+    ++L DA+FEA+Q  K +T D      ++  PK L  A+EN+
Sbjct: 294 VKLSTNETKVRLGLAESLSQVLDDAEFEADQQGKKITIDIDEAIELSHYPKSLSRAIENL 353

Query: 366 VRNAIHYGQQQIHVAFTIQDQQLIVSVDDDGEGVPEEELADIFRPFYRVSTARDRHSGGT 425
           +RNAI Y Q  IH+  +  + Q+ +++ DDG G+   EL  IF+PFYR  +AR R SGG 
Sbjct: 354 LRNAIRYAQSDIHLLASQANGQVQITIKDDGPGIDPAELEAIFKPFYRPDSARQRESGGW 413

Query: 426 GLGLAITENAIRQHSGTISANRSHLGGLQVRFTLP 460
           GLGLAITE AI  H G I A      GL+V  +LP
Sbjct: 414 GLGLAITEAAISAHKGKIRAENRQPHGLEVNISLP 448