Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Copper-sensing two-component system response regulator CpxR from Pseudomonas fluorescens FW300-N2E2

 Score =  211 bits (537), Expect = 9e-60
 Identities = 107/228 (46%), Positives = 162/228 (71%), Gaps = 2/228 (0%)

Query: 1   MAHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAG-LAAVSDEIDLILLDVMMPKLNG 59
           M  +LL+DDD ELT +L++ L+ EGFE +  + GE G + A+S    +++LDVM+P+L+G
Sbjct: 1   MISVLLVDDDQELTGMLSQYLEREGFEATAVHTGEEGEVQALSGRYSIVVLDVMLPRLSG 60

Query: 60  METLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ 119
           +E L+R+R     PV++LTA+G+ ID++ GLELGADDY+PKP S  EL+AR+RAI+RR Q
Sbjct: 61  IEVLRRIRAVSQVPVVLLTARGDNIDKITGLELGADDYVPKPSSPGELVARLRAIMRRVQ 120

Query: 120 NGLTPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLSI 179
               P +S+VI    + ++PGK++A  QG+ L +T+TEF+LL    +  G  ++K+ LS+
Sbjct: 121 PADRP-SSEVIRTGPLVLWPGKRQALWQGRELGVTSTEFSLLEELARCAGQVVSKQNLSL 179

Query: 180 EVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMVQE 227
             LG  L  +DR ID+H+S++R KL  RPD KA I+++RG GYL++ E
Sbjct: 180 NALGCPLTRYDRRIDVHISSIRHKLGPRPDAKAWIQSVRGLGYLLIVE 227