Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., response regulator transcription factor from Synechocystis sp000284455 PCC 6803

 Score =  154 bits (390), Expect = 1e-42
 Identities = 91/227 (40%), Positives = 133/227 (58%), Gaps = 9/227 (3%)

Query: 4   ILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVSD-EIDLILLDVMMPKLNGMET 62
           IL++DD+  +  +L   L   G+E+  A DGE  +A   + + DL++LDVMMPKL+G   
Sbjct: 8   ILVVDDEASIRRILETRLSMIGYEVVTAADGEEAIATFHESDPDLVVLDVMMPKLDGYGV 67

Query: 63  LKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQNGL 122
            + LR++   P++MLTA G+  DR+ GLELGADDY+ KPFS +EL ARIR++LRR     
Sbjct: 68  CQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRRVDKNG 127

Query: 123 TP--KNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLSIE 180
            P   +S V++   I++   K++ Y   + + LT  EF+LL   V   G   ++  +  E
Sbjct: 128 MPGIPSSGVLQIATIRIDTNKRQVYKGDERIRLTGMEFSLLELLVSRSGEPFSRSEILQE 187

Query: 181 VLG----KHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYL 223
           V G    +H+    R +D+H+S LR KL E P     I T RG GYL
Sbjct: 188 VWGYTPERHVDT--RVVDVHISRLRAKLEEDPSNPELILTARGTGYL 232