Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  157 bits (396), Expect = 2e-43
 Identities = 91/230 (39%), Positives = 138/230 (60%), Gaps = 14/230 (6%)

Query: 2   AHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAAVS-DEIDLILLDVMMPKLNGM 60
           +H+L+++D+  L +LL   L+ EG+ +S+A DGE  +  V+ D+ D+++LD M+P L+G+
Sbjct: 3   SHVLIVEDEVSLVTLLRYNLEKEGYRVSEAMDGEEAMTLVAEDQPDVVILDWMLPSLSGI 62

Query: 61  ETLKRLREKWAT---PVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRR 117
           E  ++LR K  T   P+LMLTA+GEE DR+ GL  GADDY+ KPFS  ELLAR++A+LRR
Sbjct: 63  EVCRQLRRKPRTRDLPILMLTARGEESDRIRGLNTGADDYMSKPFSMPELLARVKALLRR 122

Query: 118 TQNGLTPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEML 177
            Q          +   D+ +  G       G+ + L  TEF LL   +Q+PGA  ++E L
Sbjct: 123 AQ---PTSAKGTLSYSDVVMDLGAHRVTRGGRYIHLGPTEFRLLQFLMQNPGAVFSREEL 179

Query: 178 SIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKAR---IKTLRGRGYLM 224
              V G  +    R +D+H+  LRK L    +G+A    I+T+R  GY +
Sbjct: 180 LNAVWGPDIYVEPRTVDVHIRRLRKAL----NGEASTDLIRTVRAAGYAL 225