Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  275 bits (704), Expect = 4e-79
 Identities = 138/224 (61%), Positives = 175/224 (78%), Gaps = 1/224 (0%)

Query: 1   MAHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLA-AVSDEIDLILLDVMMPKLNG 59
           M+ ILLIDDD  L  LL ++L+ EGF ++ A+DGEAGLA A+  + DLILLDVM+PKLNG
Sbjct: 1   MSQILLIDDDLGLAELLAQLLELEGFNLTLAHDGEAGLALALEQQFDLILLDVMLPKLNG 60

Query: 60  METLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ 119
            E LK LR K  TPVLMLTA+G+EIDRV+GLE+GADDYLPKPF+DREL+ARI+AI+RRT 
Sbjct: 61  FEVLKALRSKKQTPVLMLTARGDEIDRVVGLEIGADDYLPKPFNDRELVARIKAIIRRTS 120

Query: 120 NGLTPKNSDVIECQDIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEMLSI 179
           + +  +   ++E  DI++ P +QE  CQ QLL LT TEF+LL H +Q  G  L+K+ LS 
Sbjct: 121 HQMDEQQPSILEFADIKLDPSRQEVLCQDQLLILTGTEFSLLYHMIQHSGEVLSKDNLSE 180

Query: 180 EVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYL 223
            VLGK L  FDR++DMH+SNLRKKLPER DG+ R+KTLRG+GY+
Sbjct: 181 NVLGKKLMPFDRSLDMHLSNLRKKLPERADGRPRVKTLRGKGYI 224