Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., response regulator with CheY-like receiver domain and winged-helix DNA-binding domain from Dechlorosoma suillum PS

 Score =  199 bits (505), Expect = 5e-56
 Identities = 110/232 (47%), Positives = 160/232 (68%), Gaps = 8/232 (3%)

Query: 1   MAHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLAA-VSDEIDLILLDVMMPKLNG 59
           M  +LL+DDDTEL ++L E L+ E F ++ A+DGEAG AA +S +  L +LDVMMPK +G
Sbjct: 1   MTKLLLVDDDTELANMLREYLEREDFSVTLAHDGEAGAAAALSGDYALAVLDVMMPKASG 60

Query: 60  METLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ 119
           M+ L R+R     PV+MLTAKG++IDR+IGLE+GADDY+ KP + REL+ARIRA+LRR Q
Sbjct: 61  MDALSRIRAASDMPVIMLTAKGDDIDRIIGLEMGADDYVQKPCTPRELVARIRAVLRRFQ 120

Query: 120 NGLTPKNSDVIECQ----DIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKE 175
              T +++D I  Q     + ++P ++ A      L LT+TEF LL    ++ G  ++K 
Sbjct: 121 ---TRESADDIPAQIRVGPLTLWPARRAAQWGEAPLTLTSTEFNLLQVLARNAGKAVSKP 177

Query: 176 MLSIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYLMVQE 227
            LS + +G+ L+ FDR+ID+H+S++R KL  R DG+  I+T+RG GY + +E
Sbjct: 178 DLSEQAMGRPLSRFDRSIDVHMSSIRHKLGLREDGRTWIQTVRGIGYQLTRE 229