Pairwise Alignments

Query, 228 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., two component transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  246 bits (627), Expect = 3e-70
 Identities = 130/227 (57%), Positives = 169/227 (74%), Gaps = 6/227 (2%)

Query: 1   MAHILLIDDDTELTSLLTEVLQYEGFEISQANDGEAGLA-AVSDEIDLILLDVMMPKLNG 59
           M+ ILLIDDD  L+ LL ++L+ EGF+++ A DG+ GL  A++ + DLILLDVM+PKLNG
Sbjct: 1   MSRILLIDDDLGLSELLGQLLELEGFKLTLAYDGKQGLELALAGDYDLILLDVMLPKLNG 60

Query: 60  METLKRLREKWATPVLMLTAKGEEIDRVIGLELGADDYLPKPFSDRELLARIRAILRRTQ 119
            E L+ LR+   TPVLMLTA+G+EIDRV+GLE+GADDYLPKPF+DREL+ARIRAI+RR+ 
Sbjct: 61  FEVLRALRQHKQTPVLMLTARGDEIDRVVGLEIGADDYLPKPFNDRELIARIRAIIRRSH 120

Query: 120 NGLTPKNSDVIECQ---DIQVYPGKQEAYCQGQLLELTTTEFALLTHFVQSPGATLTKEM 176
             LT +       Q   D+++ P +QEAYC  QL+ LT TEF LL       G  + KE 
Sbjct: 121 --LTAQEIHATPAQEFGDLRLDPSRQEAYCNEQLIILTGTEFTLLHTLALHAGELMNKEE 178

Query: 177 LSIEVLGKHLAAFDRAIDMHVSNLRKKLPERPDGKARIKTLRGRGYL 223
           L+  VLGK L  FDR++DMH+SNLRKKLPER DG+ R+KT+RG+GY+
Sbjct: 179 LNEIVLGKKLMPFDRSLDMHLSNLRKKLPERSDGRPRVKTIRGKGYI 225