Pairwise Alignments

Query, 302 a.a., cation-efflux pump FieF from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., cation-efflux pump from Rhodopseudomonas palustris CGA009

 Score =  126 bits (316), Expect = 1e-33
 Identities = 81/283 (28%), Positives = 147/283 (51%), Gaps = 12/283 (4%)

Query: 5   EYARLVTMAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVLRFA 64
           + A   +  A  +   ++ +   K A     GS++L++  + S +D+ A+++   V+R +
Sbjct: 3   DVASTKSRVAAVSVVASATMAAAKFAVGIAIGSLALISEALHSSIDLVATIITWFVVRIS 62

Query: 65  LQPADHEHAFGHGKAESLAALAQAMFISGSACFLILNG--VDRFFRPHELNAPELGIYVS 122
            +PAD  H +GHGK ESL+AL     +     +++  G  V+ + R  E  AP    Y++
Sbjct: 63  DRPADDAHHYGHGKIESLSALGVIAML-----YVLAGGILVEAYSRLREGAAPPTFSYLA 117

Query: 123 AIAILVTFGLVLFQRYVVRKTG----SQAIAADSLHYQSDLLMNAAIMVALGLSWWGLGQ 178
            + + V   + L++ + + +T     SQA+AAD+LH+ SD+L + A++  L L+  G   
Sbjct: 118 FVILGVDIVVNLWRAWALHRTAVATKSQALAADALHFASDVLGSFAVIAGLALAAAGFHW 177

Query: 179 ADAIFAIGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTR 238
            DA  AIG+ + I     ++    +QTLLDR  P+   ++      +V GV+G+ +LR R
Sbjct: 178 GDAAAAIGVAVMISLLGLRLGRSTIQTLLDR-APEGVSDKAREAIGAVPGVVGVERLRAR 236

Query: 239 MSGPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADV 281
           M GP  FI   +E+     +    +I  + ++ + E F  AD+
Sbjct: 237 MVGPTHFIDALVEVPRTYPIDRIDEIKRKAQESMSEIFGDADL 279



 Score = 44.3 bits (103), Expect = 5e-09
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%)

Query: 239 MSGPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADVLIHQDPHSVVLEAEQQQ 298
           + G    + + LE+D N+ L+EAH I+ ++ED +RE F GADV +  D H   LE E  Q
Sbjct: 316 LGGHKLIVSIDLEVDGNMPLIEAHDIAHKLEDHIREDF-GADVEV--DTHIEPLEPELPQ 372

Query: 299 KS 300
            S
Sbjct: 373 GS 374