Pairwise Alignments

Query, 302 a.a., cation-efflux pump FieF from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Conserved membrane protein from Mycobacterium tuberculosis H37Rv

 Score = 73.6 bits (179), Expect = 6e-18
 Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 7/256 (2%)

Query: 20  VASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVLRFALQPADHEHAFGHGKA 79
           V  L  ++++    ++GSV+L A  I +  D   +V   I      +PA   + +G G+ 
Sbjct: 50  VLGLTALIQIVIVVMSGSVALAADTIHNFADALTAVPLWIAFALGAKPATRRYTYGFGRV 109

Query: 80  ESLAALAQAMFISGSACFLILNGVDRFFRPHELNAPELGIYVSAIAILVTFGLVLFQRYV 139
           E LA       I+ SA       + R   P ++           +  +    + L++  V
Sbjct: 110 EDLAGSFVVAMITMSAIIAGYEAIARLIHPQQIEHVGWVALAGLVGFIGNEWVALYRIRV 169

Query: 140 VRKTGSQAIAADSLHYQSDLLMNAAIMVALGLSWWGLGQADAIFAIGIGLYILFSAFKMV 199
             + GS A+ AD LH ++D   + A++ + G    G   AD I    +GL I  +   ++
Sbjct: 170 GHRIGSAALIADGLHARTDGFTSLAVLCSAGGVALGFPLADPI----VGLLITAAILAVL 225

Query: 200 HDAVQTLLDRKLPDEELEQIHAICLSVA---GVIGMHQLRTRMSGPVRFIQLHLELDDNI 256
             A + +  R L   +   + A   ++A   GV  +  +R R  G        L++D  +
Sbjct: 226 RTAARDVFRRLLDGVDPAMVDAAEQALAARPGVQAVRSVRMRWIGHRLHADAELDVDPAL 285

Query: 257 SLLEAHQISDRVEDKL 272
            L +AH+I+   E +L
Sbjct: 286 DLAQAHRIAHDAEHEL 301



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 24/147 (16%)

Query: 103 VDRFFRPHELNAPE----------LGIYVSAIAILVTFGLVLFQRYVVRKTGSQAIAADS 152
           +   F PH  +A +           GI    I++LV     L Q  +V  +GS A+AAD+
Sbjct: 15  IKEIFAPHSHDAADSVDDTLESTAAGIRTVKISLLVLGLTALIQIVIVVMSGSVALAADT 74

Query: 153 LHYQSDLLMNAAIMVALGLS--------WWGLGQADAIFAIGIGLYILFSAFKMVHDAVQ 204
           +H  +D L    + +A  L          +G G+ + +    +   I  SA    ++A+ 
Sbjct: 75  IHNFADALTAVPLWIAFALGAKPATRRYTYGFGRVEDLAGSFVVAMITMSAIIAGYEAIA 134

Query: 205 TLLDRKLPDEELEQIHAICLSVAGVIG 231
            L+      +++E  H   +++AG++G
Sbjct: 135 RLIH----PQQIE--HVGWVALAGLVG 155