Pairwise Alignments

Query, 302 a.a., cation-efflux pump FieF from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., cation efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  250 bits (639), Expect = 2e-71
 Identities = 131/286 (45%), Positives = 185/286 (64%)

Query: 5   EYARLVTMAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVLRFA 64
           +Y   V +A+  + A A  L+ +K+ AW  +GS S+LASL DS  D  AS++N I +R+A
Sbjct: 6   QYDFWVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYA 65

Query: 65  LQPADHEHAFGHGKAESLAALAQAMFISGSACFLILNGVDRFFRPHELNAPELGIYVSAI 124
           + PADH+H +GHGKAE LAALAQ+ FI GSA  L+  G +R   P  +    LG+ VS +
Sbjct: 66  IVPADHDHRYGHGKAEPLAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVV 125

Query: 125 AILVTFGLVLFQRYVVRKTGSQAIAADSLHYQSDLLMNAAIMVALGLSWWGLGQADAIFA 184
           AI++T  LVL Q+  +  T S  + ADSLHY+SDL +NAA+++AL LS +G   AD +FA
Sbjct: 126 AIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLNAAVLLALVLSQYGWWWADGLFA 185

Query: 185 IGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTRMSGPVR 244
           + I  YI   AF + + ++Q LLDR+L ++  ++I  I      V+G+H LRTR +G   
Sbjct: 186 VLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKEDPRVLGLHDLRTRQAGKTV 245

Query: 245 FIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADVLIHQDPHSV 290
           FIQ HLELD N+SL EAH I+D    +++  F  A+V+IHQDP  V
Sbjct: 246 FIQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQV 291