Pairwise Alignments

Query, 302 a.a., cation-efflux pump FieF from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., cation efflux family protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  114 bits (285), Expect = 3e-30
 Identities = 72/289 (24%), Positives = 149/289 (51%), Gaps = 3/289 (1%)

Query: 2   MKKEYARLVTMAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVL 61
           MK +  +++   +W +T   ++L   K+      GS+++L   IDS  D+  S+V +   
Sbjct: 1   MKAKREQILIRTSWISTIGNAILSTSKIIVGLWAGSLAVLGDGIDSATDVIISIVMIFTA 60

Query: 62  RFALQPADHEHAFGHGKAESLAALAQAMFISGSACFLILNGVDRFFRPHELNAPE-LGIY 120
           R   QP   ++ FG+ KAE +A    ++ I  +   ++++ +   F       P  + IY
Sbjct: 61  RIISQPPSKKYVFGYEKAEGIATKILSLVIFYAGVQMLISSIGSIFSEEAKEIPSAIAIY 120

Query: 121 VSAIAILVTFGLVLFQRYVVRKTGSQAIAADSLHYQSDLLMNAAIMVALGLSW-WGLGQA 179
           V+  +I+    L L+Q    +K  S  + A++++ ++D+++++ +++ L  ++ + L   
Sbjct: 121 VTIFSIIGKLLLALYQYKQGKKIDSSMLTANAINMRNDVIISSGVLLGLIFTFIFKLPIL 180

Query: 180 DAIFAIGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTRM 239
           D+I  + I L+I+ S+  +  D+   L+D         +I     +V G    H++R+RM
Sbjct: 181 DSITGLIISLFIIKSSIGIFIDSNVELMDGVKDVNVYNKIFEAVETVPGASNPHRVRSRM 240

Query: 240 SGPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGA-DVLIHQDP 287
            G +  I L +E++  I++ +AHQI+D VE  ++       D+L+H +P
Sbjct: 241 IGNLYMITLDIEVNPQITITQAHQIADAVEKSIKSSIDNVYDILVHVEP 289